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- Adobe Point (cape)
- Alambique Creek (stream)
- Alpine Creek (stream)
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- Año Nuevo Creek (stream)
- Año Nuevo Island (island)
- Anza Lagoon (lake)
- Apanolio Creek (stream)
- Arroyo De En Medio (stream)
- Arroyo de los Frijoles (reservoir(s))
- Arroyo De Los Frijoles (stream)
- Arroyo De Los Frijoles Beach (beach)
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- Bay Slough (inlet)
- Bean Hollow Lake (reservoir(s))
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- Bear Gulch Reservoir (reservoir(s))
- Belmont (city)
- Belmont Channel (channel)
- Belmont Creek (stream)
- Belmont Slough (stream)
- Big Lagoon (lake)
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- Bloomquist Creek (stream)
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- Bolsa Point (cape)
- Bradley Creek (stream)
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- Broadmoor (populated place)
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- Canada Verde Creek (stream)
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- Colma Creek (stream)
- Cordilleras Creek (stream)
- Corinda Los Trancos Creek (stream)
- Corkscrew Slough (inlet)
- Corte Madera Creek (stream)
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- Coyote Creek (stream)
- Coyote Point (cape)
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- Damiani Creek (stream)
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- Deepwater Slough (inlet)
- Deer Creek (stream)
- Denniston Creek (stream)
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- Dolphin Isle (island)
- Dry Creek (stream)
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- East Basin (harbor(s))
- East Fork Tunitas Creek (stream)
- East Palo Alto (city)
- Easton Creek (stream)
- Edun Cove (bay)
- Eel Rock (island)
- El Corte de Madera Creek (stream)
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- El Granada Beach (beach)
- Elliot Creek (stream)
- Elmar Beach (beach)
- Emerald Lake Hills (city)
- Evans Creek (stream)
- Fall Creek (stream)
- Finney Creek (stream)
- First Slough (inlet)
- Flood Slough (inlet)
- Flying Cloud Isle (island)
- Flying Mist Isle (island)
- Foster City (city)
- Francis Beach (beach)
- Franklin Point (cape)
- Frenchmans Creek (stream)
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- Half Moon Bay (bay)
- Harrington Creek (stream)
- Harwood Creek (stream)
- Highlands-Baywood Park (populated place)
- Hillsborough (city)
- Hoffman Creek (stream)
- Honsinger Creek (stream)
- La Honda (city)
- Ladera (city)
- Laguna Creek (stream)
- Laguna Salada (lake)
- Lake Lucerne (reservoir(s))
- Lambert Creek (stream)
- Langley Creek (stream)
- Laurel Creek (stream)
- Little Boulder Creek (stream)
- Little Butano Creek (stream)
- Little Coyote Point (cape)
- Little Lagoon (lake)
- Lobitos (city)
- Lobitos Creek (stream)
- Locks Creek (stream)
- Loma Mar (city)
- Los Trancos Creek (stream)
- Los Trancos Woods-Vista Verde (city)
- Lower Crystal Springs Reservoir (reservoir(s))
- Lower Emerald Lake (reservoir(s))
- Madonna Creek (stream)
- Manhattan Beach (beach)
- Martin Creek (stream)
- Martini Creek (stream)
- Mateo Coast State Beaches (beach)
- McCormick Creek (stream)
- Menlo Oaks (city)
- Menlo Park (city)
- Middle Fork Gazos Creek (stream)
- Middle Fork San Pedro Creek (stream)
- Millbrae (city)
- Mills Creek (stream)
- Mills Creek (stream)
- Mindego Creek (stream)
- Mindego Lake (lake)
- Miramar Beach (beach)
- Miramontes Point (cape)
- Mitchell Creek (stream)
- Montara (city)
- Montara Beach (beach)
- Mori Point (cape)
- Moss Beach (city)
- Mussel Rock (island)
- Mussel Rock (island)
- Naples Beach (beach)
- North Fork Gazos Creek (stream)
- North Fork San Pedro Creek (stream)
- Nuff Creek (stream)
- O'Neal Slough (inlet)
- O'Neill Slough (stream)
- Oil Creek (stream)
- Old Womans Creek (stream)
- Oyster Cove Marina (marina)
- Oyster Point (cape)
- Oyster Point Channel (channel)
- Oyster Point Marina (marina)
- Pacifica (city)
- Pearsons Pond (lake)
- Pebble Beach (beach)
- Pelican Rock (island)
- Pescadero (city)
- Pescadero Beach (beach)
- Pescadero Creek (stream)
- Pescadero Point (cape)
- Peterson Creek (stream)
- Petes Harbor (harbor(s))
- Phelps Slough (stream)
- Phillip Burton Memorial Beach (beach)
- Pigeon Point (cape)
- Pigeon Point Light Station (lighthouse)
- Pilarcitos Creek (stream)
- Pilarcitos Lake (reservoir(s))
- Pillar Point (cape)
- Pillar Point Harbor (harbor(s))
- Point Año Nuevo (cape)
- Point Montara (cape)
- Point Montara Light Station (lighthouse)
- Point San Pedro (cape)
- Polhemus Creek (stream)
- Pomponio Beach (beach)
- Pomponio Creek (stream)
- Pomponio Reservoir (reservoir(s))
- Port of Redwood City (harbor(s))
- Portola Valley (city)
- Princeton (city)
- Pulgas Creek (stream)
- Purisima Creek (stream)
- Ravenswood Point (cape)
- Ravenswood Slough (inlet)
- Redondo Beach (beach)
- Redwood City (city)
- Redwood Creek (stream)
- Redwood Marina (marina)
- Redwood Point (cape)
- Redwood Shores Lagoon (bay)
- Redwood Terrace (city)
- Reflection Lake (lake)
- Rhododendron Creek (stream)
- Rockaway Beach (beach)
- Sail Rock (island)
- Sailfish Isle (island)
- San Agustin Creek (stream)
- San Andreas Creek (stream)
- San Andreas Lake (reservoir(s))
- San Bruno (city)
- San Bruno Canal (canal)
- San Bruno Channel (channel)
- San Bruno Creek (stream)
- San Bruno Shoal (bar)
- San Carlos (city)
- San Francisco Bay (bay)
- San Francisquito Creek (stream)
- San Gregorio (city)
- San Gregorio Beach (beach)
- San Gregorio Creek (stream)
- San Mateo (city)
- San Mateo Creek (stream)
- San Pedro Beach (beach)
- San Pedro Creek (stream)
- San Pedro Rock (island)
- San Vicente Creek (stream)
- Sanchez Creek (stream)
- Sand Beach (beach)
- Sausal Creek (stream)
- Schilling Lake (lake)
- Schoolhouse Creek (stream)
- Seal Rock (island)
- Seal Slough (inlet)
- Seaplane Harbor (harbor(s))
- Searsville Lake (reservoir(s))
- Sharp Park Beach (beach)
- Shearwater Isle (island)
- Shingle Mill Creek (stream)
- Shooting Star Isle (island)
- Sierra Point (cape)
- Sierra Point Marina (marina)
- Slate Creek (stream)
- Smith Slough (inlet)
- South Fork Butano Creek (stream)
- South San Francisco (city)
- Southeast Reef (bar)
- Spanish Ranch Creek (stream)
- Spencer Lake (reservoir(s))
- Stanford Weekend Acres (city)
- Steinberger Slough (inlet)
- Stone Dam Reservoir (reservoir(s))
- Surfbird Isle (island)
- Waddell Creek (stream)
- Wahleman Harbor (harbor(s))
- Wash Rock (bar)
- Water Dog Lake (reservoir(s))
- Weeks Creek (stream)
- West Basin (harbor(s))
- West Menlo Park (city)
- West Union Creek (stream)
- Westpoint Harbor (harbor(s))
- Westpoint Slough (inlet)
- Whitehouse Creek (stream)
- Woodhams Creek (stream)
- Woodruff Creek (stream)
- Woodside (city)